RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g07940.3 View Network Show in Genome Browser |
| Other Names | Os05g0171900 |
| Description | glyoxalase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 4301433-4306104 Nucleotide Length: 372 |
| Protein-coding | LOC_Os05g07940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g16940 LOC_Os02g17920 LOC_Os03g01870 |
| Downstream Genes | LOC_Os08g09250 LOC_Os05g07950 LOC_Os05g22970 LOC_Os11g44940 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR3981-5p osa-miR3981-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g07940.3 |
| Rice Genome Annotation | LOC_Os05g07940.3 |
| Ricechip | LOC_Os05g07940.3 |
| KEGG | osa:4337946 dosa:Os05t0171900-01 |
| Entrez-Gene | 4337946 |