RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g07980.1 View Network Show in Genome Browser |
| Other Names | Os05g0172300 |
| Description | DUF630/DUF632 domains containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 4317497-4321884 Nucleotide Length: 2169 |
| Protein-coding | LOC_Os05g07980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g44810 LOC_Os01g08510 |
| Downstream Genes | LOC_Os12g35620 LOC_Os12g09089 LOC_Os10g20240 LOC_Os08g14640 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR167d-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g07980.1 |
| Rice Genome Annotation | LOC_Os05g07980.1 |
| Ricechip | LOC_Os05g07980.1 |
| KEGG | osa:4337949 dosa:Os05t0172300-01 |
| Entrez-Gene | 4337949 |