RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g08010.1 View Network Show in Genome Browser |
| Other Names | Os05g0172500 |
| Description | OsFBX161 - F-box domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 4329718-4331343 Nucleotide Length: 1149 |
| Protein-coding | LOC_Os05g08010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g52750 LOC_Os04g51100 LOC_Os02g51810 LOC_Os02g40460 LOC_Os01g72780 LOC_Os04g49590 LOC_Os04g49580 LOC_Os02g29464 LOC_Os03g22880 |
| Downstream Genes | LOC_Os07g10350 LOC_Os11g10330 LOC_Os12g31350 LOC_Os10g06610 LOC_Os05g41080 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g08010.1 |
| Rice Genome Annotation | LOC_Os05g08010.1 |
| Ricechip | LOC_Os05g08010.1 |
| KEGG | osa:4337950 dosa:Os05t0172500-01 |
| Entrez-Gene | 4337950 |