RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g08770.1 View Network Show in Genome Browser |
| Other Names | Os05g0180300 |
| Description | uncharacterized protein At4g06744 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 4812048-4815430 Nucleotide Length: 1245 |
| Protein-coding | LOC_Os05g08770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g35070 LOC_Os02g40900 LOC_Os02g58090 LOC_Os01g72790 LOC_Os04g53540 LOC_Os02g44130 LOC_Os03g56944 LOC_Os05g01780 |
| Downstream Genes | LOC_Os06g19470 LOC_Os05g29870 LOC_Os08g45240 LOC_Os10g40590 LOC_Os08g38240 LOC_Os09g23370 LOC_Os09g29980 LOC_Os07g09510 LOC_Os05g32360 LOC_Os08g08820 LOC_Os08g04190 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g08770.1 |
| Rice Genome Annotation | LOC_Os05g08770.1 |
| Ricechip | LOC_Os05g08770.1 |
| KEGG | osa:4337979 dosa:Os05t0180300-01 |
| Entrez-Gene | 4337979 |