RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g08790.1 View Network Show in Genome Browser |
| Other Names | Os05g0180400 |
| Description | MAR-binding filament-like protein 1, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 4831845-4835649 Nucleotide Length: 2232 |
| Protein-coding | LOC_Os05g08790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g54340 LOC_Os04g51300 LOC_Os03g57149 |
| Downstream Genes | LOC_Os08g08030 LOC_Os09g10750 LOC_Os08g29370 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g08790.1 |
| Rice Genome Annotation | LOC_Os05g08790.1 |
| Ricechip | LOC_Os05g08790.1 |
| KEGG | osa:4337980 dosa:Os05t0180400-01 |
| Entrez-Gene | 4337980 |