RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os05g08810.1 View Network Show in Genome Browser
Other Names	Os05g0180600
Description	phosphatidylinositol 3-kinase, root isoform, putative, expressed
Gene Attributes	Chromosome: Chr5 CDS Coordinates (5'-3'): 4854173-4865677 Nucleotide Length: 2445
Protein-coding	LOC_Os05g08810

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0006629	lipid metabolic	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0016301	kinase activity	Molecular Function	IEA
GO:0016740	transferase activity	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os03g44200 LOC_Os02g55340 LOC_Os01g48920 LOC_Os03g15290 LOC_Os03g28140 LOC_Os04g57300 LOC_Os02g34884 LOC_Os02g18840 LOC_Os01g13360 LOC_Os03g23950 LOC_Os01g16470 More..
Downstream Genes	LOC_Os11g10420 LOC_Os06g17290 LOC_Os05g51230 LOC_Os11g20384 LOC_Os07g45070 LOC_Os07g45064 LOC_Os06g23290 LOC_Os09g29890 LOC_Os08g38200 LOC_Os08g44260 LOC_Os06g37180 More..

Pathways
KEGG Pathways	rn00562 rn01100

Reference
PubMed	22448275

Database Links
Gramene	LOC_Os05g08810.1
Rice Genome Annotation	LOC_Os05g08810.1
Ricechip	LOC_Os05g08810.1
KEGG	osa:4337982 dosa:Os05t0180600-02
Entrez-Gene	4337982