RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g09280.1 View Network Show in Genome Browser |
| Other Names | Os05g0184901 |
| Description | AGAP006957-PA, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 5187757-5189754 Nucleotide Length: 1407 |
| Protein-coding | LOC_Os05g09280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00564 rn00592 rn01100 |
| Metacyc Pathways | LIPASYN-PWY PWY-735 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g09280.1 |
| Rice Genome Annotation | LOC_Os05g09280.1 |
| Ricechip | LOC_Os05g09280.1 |
| KEGG | osa:9268692 dosa:Os05t0184901-01 |
| Entrez-Gene | 9268692 |