RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g09550.1 View Network Show in Genome Browser |
| Other Names | Os05g0187800 |
| Description | Der1-like family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 5394336-5398141 Nucleotide Length: 729 |
| Protein-coding | LOC_Os05g09550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g45180 LOC_Os03g27450 LOC_Os04g47970 LOC_Os03g53800 LOC_Os01g74000 LOC_Os02g02410 LOC_Os01g56930 LOC_Os02g40830 LOC_Os02g48110 |
| Downstream Genes | LOC_Os09g20090 LOC_Os08g15040 LOC_Os07g26940 LOC_Os07g42820 LOC_Os08g36530 LOC_Os06g39260 LOC_Os08g09190 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g09550.1 |
| Rice Genome Annotation | LOC_Os05g09550.1 |
| Ricechip | LOC_Os05g09550.1 |
| KEGG | osa:4338013 dosa:Os05t0187800-01 |
| Entrez-Gene | 4338013 |