RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g09650.1 View Network Show in Genome Browser |
| Other Names | Os05g0188800 |
| Description | ubiquinone biosynthesis protein COQ4, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 5450104-5451973 Nucleotide Length: 684 |
| Protein-coding | LOC_Os05g09650 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g21970 LOC_Os01g74520 LOC_Os01g40280 LOC_Os03g53400 LOC_Os03g16860 LOC_Os01g12800 LOC_Os02g41550 LOC_Os02g07760 LOC_Os03g62260 LOC_Os01g62290 LOC_Os01g16900 More.. |
| Downstream Genes | LOC_Os06g05900 LOC_Os12g01160 LOC_Os11g01154 LOC_Os11g08300 LOC_Os07g44430 LOC_Os07g29620 LOC_Os09g15480 LOC_Os05g38530 LOC_Os09g10820 LOC_Os12g12860 LOC_Os07g44710 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 osa-miR530-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g09650.1 |
| Rice Genome Annotation | LOC_Os05g09650.1 |
| Ricechip | LOC_Os05g09650.1 |
| KEGG | osa:4338019 dosa:Os05t0188800-00 |
| Entrez-Gene | 4338019 |