RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g09704.1 View Network Show in Genome Browser |
| Other Names | Os05g0189300 |
| Description | HAD superfamily phosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 5472689-5474678 Nucleotide Length: 756 |
| Protein-coding | LOC_Os05g09704 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g72290 LOC_Os02g40260 LOC_Os04g55159 LOC_Os04g28620 LOC_Os04g28520 LOC_Os01g73980 LOC_Os04g42620 LOC_Os03g45619 LOC_Os02g20560 LOC_Os03g63390 LOC_Os02g57120 More.. |
| Downstream Genes | LOC_Os05g10210 LOC_Os08g35760 LOC_Os10g05970 LOC_Os12g37650 LOC_Os10g01920 LOC_Os05g13900 LOC_Os07g01370 LOC_Os06g21270 LOC_Os08g16260 LOC_Os10g06000 LOC_Os10g05990 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | NADBIOSYNTHESISII |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g09704.1 |
| Rice Genome Annotation | LOC_Os05g09704.1 |
| Ricechip | LOC_Os05g09704.1 |
| KEGG | osa:4338021 dosa:Os05t0189300-01 |
| Entrez-Gene | 4338021 |