RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g10210.1 View Network Show in Genome Browser |
| Other Names | Os05g0190500 |
| Description | HAD superfamily phosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 5553628-5554934 Nucleotide Length: 798 |
| Protein-coding | LOC_Os05g10210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g09704 LOC_Os01g72290 LOC_Os02g40260 LOC_Os04g40730 LOC_Os03g63390 LOC_Os01g73980 LOC_Os04g28620 LOC_Os04g28520 LOC_Os03g01800 LOC_Os05g02820 LOC_Os04g55159 More.. |
| Downstream Genes | LOC_Os10g02040 LOC_Os10g01920 LOC_Os05g13900 LOC_Os06g21270 LOC_Os07g01370 LOC_Os09g07350 LOC_Os10g06000 LOC_Os10g05990 LOC_Os10g05980 LOC_Os08g35760 LOC_Os10g05970 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | NADBIOSYNTHESISII |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g10210.1 |
| Rice Genome Annotation | LOC_Os05g10210.1 |
| Ricechip | LOC_Os05g10210.1 |
| KEGG | osa:4338023 dosa:Os05t0190500-02 |
| Entrez-Gene | 4338023 |