RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g10630.1 View Network Show in Genome Browser |
| Other Names | Os05g0194600 |
| Description | O-sialoglycoprotein endopeptidase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 5791797-5797299 Nucleotide Length: 1326 |
| Protein-coding | LOC_Os05g10630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g09590 LOC_Os03g46390 LOC_Os01g36920 LOC_Os01g36890 LOC_Os02g13530 LOC_Os02g10740 LOC_Os02g32490 LOC_Os03g46610 LOC_Os03g59590 LOC_Os03g20370 LOC_Os01g16240 More.. |
| Downstream Genes | LOC_Os10g28640 LOC_Os06g06100 LOC_Os09g38759 LOC_Os08g44210 LOC_Os05g50930 LOC_Os12g43550 LOC_Os10g35720 LOC_Os08g44390 LOC_Os10g31940 LOC_Os08g25010 LOC_Os07g48780 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g10630.1 |
| Rice Genome Annotation | LOC_Os05g10630.1 |
| Ricechip | LOC_Os05g10630.1 |
| KEGG | osa:4338033 dosa:Os05t0194600-01 |
| Entrez-Gene | 4338033 |