RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g10940.1 View Network Show in Genome Browser |
| Other Names | Os05g0198400 |
| Description | metal cation transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 6090801-6094142 Nucleotide Length: 1155 |
| Protein-coding | LOC_Os05g10940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g27060 LOC_Os04g26910 LOC_Os04g26870 |
| Downstream Genes | LOC_Os08g36420 LOC_Os05g37820 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g10940.1 |
| Rice Genome Annotation | LOC_Os05g10940.1 |
| Ricechip | LOC_Os05g10940.1 |
| KEGG | osa:4338051 dosa:Os05t0198400-01 |
| Entrez-Gene | 4338051 |