RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g11010.1 View Network Show in Genome Browser |
| Other Names | Os05g0199100 |
| Description | harpin-induced protein 1 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 6164997-6166289 Nucleotide Length: 882 |
| Protein-coding | LOC_Os05g11010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g15630 LOC_Os01g68090 LOC_Os01g64450 LOC_Os01g53470 |
| Downstream Genes | LOC_Os07g06680 LOC_Os12g06260 LOC_Os12g02700 LOC_Os11g05870 LOC_Os11g02730 LOC_Os08g44410 LOC_Os08g38580 LOC_Os06g49650 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g11010.1 |
| Rice Genome Annotation | LOC_Os05g11010.1 |
| Ricechip | LOC_Os05g11010.1 |
| KEGG | osa:9268269 dosa:Os05t0199100-01 |
| Entrez-Gene | 9268269 |