RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g11550.2 View Network Show in Genome Browser |
| Other Names | Os05g0204900 |
| Description | serine/threonine protein phosphatase 5, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 6529795-6537354 Nucleotide Length: 1356 |
| Protein-coding | LOC_Os05g11550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005635 | nuclear envelope | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g58810 LOC_Os03g51900 LOC_Os03g19960 LOC_Os03g22350 LOC_Os01g27730 LOC_Os02g18830 LOC_Os03g44780 LOC_Os01g13730 LOC_Os01g08310 LOC_Os03g18410 LOC_Os01g65730 More.. |
| Downstream Genes | LOC_Os06g03780 LOC_Os09g19560 LOC_Os10g10434 LOC_Os06g47840 LOC_Os09g30412 LOC_Os09g30418 LOC_Os08g39140 LOC_Os09g18320 LOC_Os12g07300 LOC_Os12g03822 LOC_Os11g03990 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g11550.2 |
| Rice Genome Annotation | LOC_Os05g11550.2 |
| Ricechip | LOC_Os05g11550.2 |
| KEGG | osa:4338070 dosa:Os05t0204900-01 |
| Entrez-Gene | 4338070 |