RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os05g11730.1 View Network Show in Genome Browser
Other Names	Os05g0207500
Description	CGMC_GSK.7 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
Gene Attributes	Chromosome: Chr5 CDS Coordinates (5'-3'): 6657481-6661493 Nucleotide Length: 1209
Protein-coding	LOC_Os05g11730

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0007165	signal transduction	Biological Process	IEA
GO:0016301	kinase activity	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g05630 LOC_Os04g37904 LOC_Os04g56450 LOC_Os03g17700 LOC_Os03g53720 LOC_Os03g49730 LOC_Os02g15594 LOC_Os04g52000 LOC_Os02g55560 LOC_Os03g21620 LOC_Os03g43590 More..
Downstream Genes	LOC_Os06g05660 LOC_Os06g33549 LOC_Os07g32380 LOC_Os05g46230 LOC_Os06g48300 LOC_Os05g43570 LOC_Os12g41180 LOC_Os07g08000 LOC_Os06g06090 LOC_Os06g33530 LOC_Os07g48290 More..

Pathways
KEGG Pathways	rn00760

Reference
PubMed	22685166

Database Links
Gramene	LOC_Os05g11730.1
Rice Genome Annotation	LOC_Os05g11730.1
Ricechip	LOC_Os05g11730.1
KEGG	osa:4338079 dosa:Os05t0207500-01
Entrez-Gene	4338079