RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g11780.1 View Network Show in Genome Browser |
| Other Names | Os05g0208000 |
| Description | mitochondrial carrier protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 6696412-6700510 Nucleotide Length: 921 |
| Protein-coding | LOC_Os05g11780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g46070 LOC_Os02g48720 LOC_Os03g56300 LOC_Os04g56646 LOC_Os03g18550 LOC_Os03g63400 LOC_Os01g33020 LOC_Os01g54870 LOC_Os02g56000 LOC_Os01g49290 LOC_Os05g11710 More.. |
| Downstream Genes | LOC_Os05g32630 LOC_Os05g47980 LOC_Os09g38740 LOC_Os11g20790 LOC_Os07g45090 LOC_Os08g43640 LOC_Os07g46750 LOC_Os09g19734 LOC_Os07g47780 LOC_Os07g08330 LOC_Os06g23114 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g11780.1 |
| Rice Genome Annotation | LOC_Os05g11780.1 |
| Ricechip | LOC_Os05g11780.1 |
| KEGG | osa:4338082 dosa:Os05t0208000-01 |
| Entrez-Gene | 4338082 |