RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g11850.1 View Network Show in Genome Browser |
| Other Names | Os05g0209100 |
| Description | glycosyl hydrolase family 47 domain contain protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 6752222-6756394 Nucleotide Length: 1938 |
| Protein-coding | LOC_Os05g11850 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g32660 LOC_Os01g44130 LOC_Os03g11720 LOC_Os01g69210 LOC_Os01g11070 LOC_Os03g60700 LOC_Os03g08300 LOC_Os01g01640 LOC_Os04g54340 LOC_Os01g47410 LOC_Os03g37960 More.. |
| Downstream Genes | LOC_Os08g21760 LOC_Os07g33850 LOC_Os05g23600 LOC_Os06g02490 LOC_Os09g38530 LOC_Os06g49460 LOC_Os05g49200 LOC_Os06g36890 LOC_Os08g06550 LOC_Os06g44140 LOC_Os06g51084 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00513 rn01100 rn00510 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g11850.1 |
| Rice Genome Annotation | LOC_Os05g11850.1 |
| Ricechip | LOC_Os05g11850.1 |
| KEGG | osa:4338088 dosa:Os05t0209100-01 |
| Entrez-Gene | 4338088 |