RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g11990.1 View Network Show in Genome Browser |
| Other Names | Os05g0210600 |
| Description | TTL1, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 6858656-6862635 Nucleotide Length: 1446 |
| Protein-coding | LOC_Os05g11990 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g42620 LOC_Os05g01810 LOC_Os01g59150 LOC_Os02g40430 LOC_Os01g11710 LOC_Os03g51150 LOC_Os02g57120 LOC_Os03g44560 LOC_Os03g45920 LOC_Os02g40100 LOC_Os01g71474 More.. |
| Downstream Genes | LOC_Os06g06250 LOC_Os11g26190 LOC_Os08g35710 LOC_Os11g26340 LOC_Os07g08170 LOC_Os06g08770 LOC_Os08g32160 LOC_Os07g40940 LOC_Os09g25850 LOC_Os07g01370 LOC_Os07g40900 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g11990.1 |
| Rice Genome Annotation | LOC_Os05g11990.1 |
| Ricechip | LOC_Os05g11990.1 |
| KEGG | osa:4338096 dosa:Os05t0210600-01 |
| Entrez-Gene | 4338096 |