RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g13330.1 View Network Show in Genome Browser |
| Other Names | Os05g0220100 |
| Description | per1-like family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 7398476-7403351 Nucleotide Length: 1050 |
| Protein-coding | LOC_Os05g13330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g12740 LOC_Os02g46320 LOC_Os03g30460 LOC_Os01g60410 LOC_Os01g60360 LOC_Os03g27950 LOC_Os04g38340 LOC_Os02g38440 LOC_Os01g28450 LOC_Os04g57220 LOC_Os04g32950 More.. |
| Downstream Genes | LOC_Os07g03690 LOC_Os07g44650 LOC_Os09g32220 LOC_Os07g03710 LOC_Os07g03730 LOC_Os07g03740 LOC_Os06g30970 LOC_Os07g07010 LOC_Os10g11500 LOC_Os05g41120 LOC_Os06g04500 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g13330.1 |
| Rice Genome Annotation | LOC_Os05g13330.1 |
| Ricechip | LOC_Os05g13330.1 |
| KEGG | osa:4338126 dosa:Os05t0220100-01 |
| Entrez-Gene | 4338126 |