RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g13580.1 View Network Show in Genome Browser |
| Other Names | Os05g0223000 |
| Description | OsCML18 - Calmodulin-related calcium sensor protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 7533633-7534664 Nucleotide Length: 477 |
| Protein-coding | LOC_Os05g13580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0009605 | response to external stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g50130 LOC_Os04g58810 LOC_Os01g57470 LOC_Os02g54050 LOC_Os04g48350 LOC_Os02g45450 LOC_Os03g21030 LOC_Os05g01940 LOC_Os02g49450 |
| Downstream Genes | LOC_Os10g28640 LOC_Os06g46950 LOC_Os06g14420 LOC_Os12g03420 LOC_Os11g03660 |
| Reference | |
|---|---|
| PubMed | 17263873 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g13580.1 |
| Rice Genome Annotation | LOC_Os05g13580.1 |
| Ricechip | LOC_Os05g13580.1 |
| KEGG | osa:9266860 dosa:Os05t0223000-01 |
| Entrez-Gene | 9266860 |