RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g13940.1 View Network Show in Genome Browser |
| Other Names | Os05g0227600 |
| Description | retrotransposon protein, putative, unclassified, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 7746396-7748295 Nucleotide Length: 1251 |
| Protein-coding | LOC_Os05g13940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g49600 LOC_Os03g50290 LOC_Os03g28400 |
| Downstream Genes | LOC_Os06g46000 LOC_Os07g44790 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR156j-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g13940.1 |
| Rice Genome Annotation | LOC_Os05g13940.1 |
| Ricechip | LOC_Os05g13940.1 |
| KEGG | osa:4338151 dosa:Os05t0227600-00 |
| Entrez-Gene | 4338151 |