RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g14040.1 View Network Show in Genome Browser |
| Other Names | Os05g0229475 |
| Description | G-patch domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 7849847-7850262 Nucleotide Length: 213 |
| Protein-coding | LOC_Os05g14040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g14860 LOC_Os03g03390 LOC_Os02g55000 LOC_Os05g10754 LOC_Os03g18270 LOC_Os03g18264 LOC_Os04g21650 |
| Downstream Genes | LOC_Os08g19170 LOC_Os08g15080 LOC_Os06g25500 LOC_Os06g25470 LOC_Os12g13290 LOC_Os09g27970 LOC_Os08g19310 LOC_Os08g14860 LOC_Os06g31220 LOC_Os09g27610 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g14040.1 |
| Rice Genome Annotation | LOC_Os05g14040.1 |
| Ricechip | LOC_Os05g14040.1 |
| KEGG | dosa:Os05t0229475-00 |