RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g14170.1 View Network Show in Genome Browser |
| Other Names | Os05g0230600 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 7927034-7936413 Nucleotide Length: 2970 |
| Protein-coding | LOC_Os05g14170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g35260 LOC_Os02g08190 LOC_Os01g42060 LOC_Os02g18820 LOC_Os02g13110 LOC_Os05g07050 LOC_Os03g49480 LOC_Os05g05840 LOC_Os03g17310 LOC_Os03g57100 LOC_Os01g56190 More.. |
| Downstream Genes | LOC_Os12g42150 LOC_Os06g07090 LOC_Os06g02160 LOC_Os08g41270 LOC_Os08g34340 LOC_Os08g23110 LOC_Os08g05490 LOC_Os05g48620 LOC_Os07g42810 LOC_Os11g20790 LOC_Os10g08550 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR437 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g14170.1 |
| Rice Genome Annotation | LOC_Os05g14170.1 |
| Ricechip | LOC_Os05g14170.1 |
| KEGG | osa:4338159 dosa:Os05t0230600-01 |
| Entrez-Gene | 4338159 |