RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g14580.1 View Network Show in Genome Browser |
| Other Names | Os05g0235701 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 8304718-8306500 Nucleotide Length: 552 |
| Protein-coding | LOC_Os05g14580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g45400 LOC_Os01g67560 LOC_Os04g40980 LOC_Os05g05830 LOC_Os04g09810 LOC_Os04g42000 LOC_Os03g02600 LOC_Os02g02850 |
| Downstream Genes | LOC_Os06g05100 LOC_Os07g09190 LOC_Os05g33840 LOC_Os11g14230 LOC_Os08g03370 LOC_Os06g33930 LOC_Os05g47530 LOC_Os05g45770 LOC_Os09g15810 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g14580.1 |
| Rice Genome Annotation | LOC_Os05g14580.1 |
| Ricechip | LOC_Os05g14580.1 |
| KEGG | dosa:Os05t0235701-00 |