RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g14590.1 View Network Show in Genome Browser |
| Other Names | Os05g0235800 |
| Description | MCM6 - Putative minichromosome maintenance MCM complex subunit 6, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 8312907-8319399 Nucleotide Length: 2493 |
| Protein-coding | LOC_Os05g14590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g36390 LOC_Os02g55410 LOC_Os04g10650 LOC_Os03g08640 LOC_Os02g56130 LOC_Os02g58220 LOC_Os01g63710 LOC_Os02g30800 LOC_Os03g02680 LOC_Os03g55200 LOC_Os03g01850 More.. |
| Downstream Genes | LOC_Os05g39850 LOC_Os11g29380 LOC_Os12g37400 LOC_Os05g29010 LOC_Os12g03130 LOC_Os11g03430 LOC_Os05g46270 LOC_Os06g08790 LOC_Os05g38850 LOC_Os07g43540 LOC_Os07g22400 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g14590.1 |
| Rice Genome Annotation | LOC_Os05g14590.1 |
| Ricechip | LOC_Os05g14590.1 |
| KEGG | osa:4338176 dosa:Os05t0235800-01 |
| Entrez-Gene | 4338176 |