RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g14800.1 View Network Show in Genome Browser |
| Other Names | |
| Description | cycloartenol synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 8407317-8415980 Nucleotide Length: 996 |
| Protein-coding | LOC_Os05g14800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g04760 LOC_Os03g59040 LOC_Os03g08570 LOC_Os03g52180 LOC_Os03g52170 |
| Downstream Genes | LOC_Os11g18366 LOC_Os07g10130 LOC_Os07g10490 LOC_Os06g51290 LOC_Os12g43130 LOC_Os09g38320 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00100 rn01100 rn01110 |
| Metacyc Pathways | PWY-2541 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g14800.1 |
| Rice Genome Annotation | LOC_Os05g14800.1 |
| Ricechip | LOC_Os05g14800.1 |