RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g14860.1 View Network Show in Genome Browser |
| Other Names | Os05g0238200 |
| Description | seven in absentia protein family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 8440434-8445724 Nucleotide Length: 1086 |
| Protein-coding | LOC_Os05g14860 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g51600 LOC_Os02g19140 LOC_Os01g11580 LOC_Os02g49080 LOC_Os04g14190 LOC_Os01g55270 LOC_Os02g02990 LOC_Os02g15220 LOC_Os01g66300 LOC_Os03g03130 LOC_Os01g46926 More.. |
| Downstream Genes | LOC_Os11g14220 LOC_Os05g23950 LOC_Os12g08070 LOC_Os05g38480 LOC_Os07g38730 LOC_Os11g26910 LOC_Os09g36830 LOC_Os05g34670 LOC_Os10g39120 LOC_Os07g22220 LOC_Os08g09340 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g14860.1 |
| Rice Genome Annotation | LOC_Os05g14860.1 |
| Ricechip | LOC_Os05g14860.1 |
| KEGG | osa:4338181 dosa:Os05t0238200-01 |
| Entrez-Gene | 4338181 |