RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g15370.1 View Network Show in Genome Browser |
| Other Names | Os05g0243300 |
| Description | ribosomal protein L13, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 8697518-8704009 Nucleotide Length: 576 |
| Protein-coding | LOC_Os05g15370 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g55930 LOC_Os03g54890 LOC_Os03g60100 LOC_Os03g61260 LOC_Os03g39850 LOC_Os02g44810 LOC_Os01g72130 LOC_Os03g12020 LOC_Os03g49710 LOC_Os03g04590 LOC_Os02g56960 More.. |
| Downstream Genes | LOC_Os07g46440 LOC_Os12g03090 LOC_Os11g03400 LOC_Os12g01430 LOC_Os06g39700 LOC_Os07g01870 LOC_Os09g20220 LOC_Os05g19954 LOC_Os07g05800 LOC_Os09g07910 LOC_Os10g34020 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g15370.1 |
| Rice Genome Annotation | LOC_Os05g15370.1 |
| Ricechip | LOC_Os05g15370.1 |
| KEGG | osa:4338199 dosa:Os05t0243300-01 |
| Entrez-Gene | 4338199 |