RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g15510.1 View Network Show in Genome Browser |
| Other Names | Os05g0244500 |
| Description | cellulase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 8766743-8774386 Nucleotide Length: 1578 |
| Protein-coding | LOC_Os05g15510 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g58160 LOC_Os01g47070 LOC_Os05g05840 LOC_Os04g31390 LOC_Os01g40470 |
| Downstream Genes | LOC_Os10g22570 LOC_Os09g20090 LOC_Os06g37080 LOC_Os12g31380 LOC_Os06g15420 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 rn01100 |
| Metacyc Pathways | PWY-1001 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g15510.1 |
| Rice Genome Annotation | LOC_Os05g15510.1 |
| Ricechip | LOC_Os05g15510.1 |
| KEGG | osa:4338201 dosa:Os05t0244500-01 |
| Entrez-Gene | 4338201 |