RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g15630.1 View Network Show in Genome Browser |
| Other Names | Os05g0245300 |
| Description | membrane associated DUF588 domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 8846586-8848673 Nucleotide Length: 489 |
| Protein-coding | LOC_Os05g15630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g10870 LOC_Os01g47200 LOC_Os01g61160 LOC_Os01g41190 LOC_Os03g14170 |
| Downstream Genes | LOC_Os12g38100 LOC_Os11g34730 LOC_Os09g07480 LOC_Os05g27790 LOC_Os08g37300 LOC_Os07g47210 LOC_Os12g26690 LOC_Os08g24790 LOC_Os07g40870 LOC_Os07g04960 |
| Reference | |
|---|---|
| PubMed | 16808934 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g15630.1 |
| Rice Genome Annotation | LOC_Os05g15630.1 |
| Ricechip | LOC_Os05g15630.1 |
| KEGG | osa:4338204 dosa:Os05t0245300-01 |
| Entrez-Gene | 4338204 |