RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g16660.2 View Network Show in Genome Browser |
| Other Names | Os05g0256000 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 9448800-9454469 Nucleotide Length: 981 |
| Protein-coding | LOC_Os05g16660 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g54700 LOC_Os01g03070 LOC_Os02g54690 LOC_Os03g18570 LOC_Os03g18580 LOC_Os01g58220 LOC_Os03g58430 LOC_Os04g51630 LOC_Os03g08440 LOC_Os01g04730 LOC_Os02g13530 More.. |
| Downstream Genes | LOC_Os07g03230 LOC_Os10g41960 LOC_Os06g48350 LOC_Os09g15770 LOC_Os08g13690 LOC_Os05g41900 LOC_Os05g51500 LOC_Os12g41400 LOC_Os12g05430 LOC_Os12g07740 LOC_Os05g49150 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g16660.2 |
| Rice Genome Annotation | LOC_Os05g16660.2 |
| Ricechip | LOC_Os05g16660.2 |
| KEGG | osa:4338229 dosa:Os05t0256000-01 |
| Entrez-Gene | 4338229 |