RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g18750.1 View Network Show in Genome Browser |
| Other Names | Os05g0270000 |
| Description | ribosomal protein L25, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 10865366-10869233 Nucleotide Length: 798 |
| Protein-coding | LOC_Os05g18750 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g49900 LOC_Os03g22610 LOC_Os02g03540 LOC_Os01g52530 LOC_Os01g58790 LOC_Os03g56840 LOC_Os02g48390 LOC_Os01g41030 LOC_Os01g09000 LOC_Os01g40620 LOC_Os03g55240 More.. |
| Downstream Genes | LOC_Os05g47630 LOC_Os05g51800 LOC_Os06g41360 LOC_Os08g09940 LOC_Os10g22380 LOC_Os09g25960 LOC_Os07g12890 LOC_Os10g35840 LOC_Os09g25990 LOC_Os09g26000 LOC_Os11g43600 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g18750.1 |
| Rice Genome Annotation | LOC_Os05g18750.1 |
| Ricechip | LOC_Os05g18750.1 |
| KEGG | osa:4338257 dosa:Os05t0270000-01 |
| Entrez-Gene | 4338257 |