RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g18774.1 View Network Show in Genome Browser |
| Other Names | Os05g0270400 |
| Description | protein phosphatase 1 regulatory subunit 11, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 10899693-10900830 Nucleotide Length: 378 |
| Protein-coding | LOC_Os05g18774 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g13640 LOC_Os03g16110 LOC_Os02g16550 LOC_Os02g26814 LOC_Os02g54340 LOC_Os02g43690 LOC_Os01g08450 LOC_Os04g39040 LOC_Os02g08480 LOC_Os02g57450 LOC_Os04g40850 More.. |
| Downstream Genes | LOC_Os06g09290 LOC_Os06g07978 LOC_Os06g07878 LOC_Os06g07140 LOC_Os05g48450 LOC_Os07g49150 LOC_Os08g04460 LOC_Os06g06880 LOC_Os10g40200 LOC_Os07g08840 LOC_Os07g25420 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1874-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g18774.1 |
| Rice Genome Annotation | LOC_Os05g18774.1 |
| Ricechip | LOC_Os05g18774.1 |
| KEGG | osa:4338259 dosa:Os05t0270400-01 |
| Entrez-Gene | 4338259 |