RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g19480.1 View Network Show in Genome Browser |
| Other Names | Os05g0275700 |
| Description | peroxisome assembly protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 11320504-11327124 Nucleotide Length: 1029 |
| Protein-coding | LOC_Os05g19480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g14790 LOC_Os03g57210 LOC_Os04g42490 LOC_Os02g42314 LOC_Os03g55930 LOC_Os02g10740 LOC_Os04g35060 LOC_Os01g43030 LOC_Os04g54330 LOC_Os03g62110 LOC_Os02g09810 More.. |
| Downstream Genes | LOC_Os10g32960 LOC_Os07g41800 LOC_Os08g39080 LOC_Os08g44240 LOC_Os07g05810 LOC_Os06g47320 LOC_Os09g38530 LOC_Os06g16420 LOC_Os08g02640 LOC_Os08g41730 LOC_Os06g40200 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g19480.1 |
| Rice Genome Annotation | LOC_Os05g19480.1 |
| Ricechip | LOC_Os05g19480.1 |
| KEGG | osa:4338276 dosa:Os05t0275700-01 |
| Entrez-Gene | 4338276 |