RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g19630.1 View Network Show in Genome Browser |
| Other Names | Os05g0277300 |
| Description | peptide chain release factor protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 11436297-11439153 Nucleotide Length: 945 |
| Protein-coding | LOC_Os05g19630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g14510 LOC_Os02g03540 LOC_Os01g58790 LOC_Os01g52530 LOC_Os02g48390 LOC_Os01g44210 LOC_Os01g43030 LOC_Os04g54330 LOC_Os02g42320 LOC_Os03g26970 LOC_Os05g03830 More.. |
| Downstream Genes | LOC_Os12g41830 LOC_Os10g35840 LOC_Os06g41360 LOC_Os12g01160 LOC_Os11g01154 LOC_Os05g51800 LOC_Os08g07960 LOC_Os07g46570 LOC_Os08g09940 LOC_Os12g10784 LOC_Os07g27780 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g19630.1 |
| Rice Genome Annotation | LOC_Os05g19630.1 |
| Ricechip | LOC_Os05g19630.1 |
| KEGG | osa:4338281 dosa:Os05t0277300-02 |
| Entrez-Gene | 4338281 |