RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g20050.1 View Network Show in Genome Browser |
| Other Names | Os05g0280200 |
| Description | ras-related protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 11723480-11725716 Nucleotide Length: 654 |
| Protein-coding | LOC_Os05g20050 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005768 | endosome | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g64320 LOC_Os01g16030 LOC_Os04g59330 LOC_Os04g32030 LOC_Os03g16980 LOC_Os05g03174 LOC_Os01g12730 LOC_Os03g13460 LOC_Os01g37800 LOC_Os03g09140 LOC_Os03g50560 More.. |
| Downstream Genes | LOC_Os05g32500 LOC_Os05g32110 LOC_Os08g13350 LOC_Os12g25690 LOC_Os06g11990 LOC_Os11g26190 LOC_Os08g42000 LOC_Os05g44050 LOC_Os07g09680 LOC_Os07g41180 LOC_Os07g33850 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g20050.1 |
| Rice Genome Annotation | LOC_Os05g20050.1 |
| Ricechip | LOC_Os05g20050.1 |
| KEGG | osa:4338288 dosa:Os05t0280200-01 |
| Entrez-Gene | 4338288 |