RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g20930.1 View Network Show in Genome Browser |
| Other Names | Os05g0286100 |
| Description | ZOS5-07 - C2H2 zinc finger protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 12308058-12309321 Nucleotide Length: 957 |
| Protein-coding | LOC_Os05g20930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g57800 LOC_Os04g01230 LOC_Os02g15690 LOC_Os03g08790 LOC_Os03g55930 LOC_Os01g55950 LOC_Os04g38570 LOC_Os03g60960 LOC_Os02g53200 LOC_Os02g43600 LOC_Os03g50810 More.. |
| Downstream Genes | LOC_Os09g07350 LOC_Os08g23180 LOC_Os10g19880 LOC_Os06g05550 LOC_Os07g13800 LOC_Os07g13660 LOC_Os08g39550 LOC_Os11g44810 LOC_Os08g39490 LOC_Os09g32988 LOC_Os10g41310 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g20930.1 |
| Rice Genome Annotation | LOC_Os05g20930.1 |
| Ricechip | LOC_Os05g20930.1 |
| KEGG | osa:4338296 dosa:Os05t0286100-01 |
| Entrez-Gene | 4338296 |