RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g22920.2 View Network Show in Genome Browser |
| Other Names | Os05g0295100 |
| Description | digestive organ expansion factor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 13027760-13046685 Nucleotide Length: 1713 |
| Protein-coding | LOC_Os05g22920 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g40340 LOC_Os02g50370 LOC_Os03g61200 LOC_Os03g22890 LOC_Os03g05720 LOC_Os03g52470 LOC_Os04g52200 LOC_Os03g18410 LOC_Os05g05450 LOC_Os02g12600 LOC_Os03g22320 More.. |
| Downstream Genes | LOC_Os06g01980 LOC_Os05g51490 LOC_Os07g10350 LOC_Os06g40120 LOC_Os11g19250 LOC_Os10g25110 LOC_Os05g28320 LOC_Os05g42300 LOC_Os08g28980 LOC_Os06g09570 LOC_Os07g01920 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g22920.2 |
| Rice Genome Annotation | LOC_Os05g22920.2 |
| Ricechip | LOC_Os05g22920.2 |
| KEGG | osa:4338320 dosa:Os05t0295100-02 |
| Entrez-Gene | 4338320 |