RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g23250.1 View Network Show in Genome Browser |
| Other Names | Os05g0297800 |
| Description | Leucine Rich Repeat family protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 13280293-13280720 Nucleotide Length: 3921 |
| Protein-coding | LOC_Os05g23250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0004872 | receptor activity | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g11340 LOC_Os02g06120 LOC_Os02g06280 LOC_Os02g39100 LOC_Os02g06180 LOC_Os02g58030 LOC_Os02g06200 LOC_Os02g06030 LOC_Os03g43650 |
| Downstream Genes | LOC_Os11g39310 LOC_Os06g38640 LOC_Os11g12560 LOC_Os12g30760 LOC_Os08g39550 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g23250.1 |
| Rice Genome Annotation | LOC_Os05g23250.1 |
| Ricechip | LOC_Os05g23250.1 |
| KEGG | dosa:Os05t0297800-01 |
| Entrez-Gene | 9270504 |