RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g23260.1 View Network Show in Genome Browser |
| Other Names | Os05g0297900 |
| Description | OsSigP4 - Putative Type I Signal Peptidase homologue; employs a putative Ser/His catalytic dyad, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 13286001-13287547 Nucleotide Length: 543 |
| Protein-coding | LOC_Os05g23260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g08340 LOC_Os04g58090 LOC_Os05g06440 LOC_Os01g04030 LOC_Os04g50990 LOC_Os02g16709 LOC_Os02g47140 LOC_Os03g03450 LOC_Os03g56580 LOC_Os02g08180 LOC_Os04g01240 More.. |
| Downstream Genes | LOC_Os11g40500 LOC_Os08g17680 LOC_Os06g05740 LOC_Os09g27830 LOC_Os06g05240 LOC_Os11g09280 LOC_Os09g19734 LOC_Os09g28000 LOC_Os11g38780 LOC_Os05g49740 LOC_Os05g36070 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g23260.1 |
| Rice Genome Annotation | LOC_Os05g23260.1 |
| Ricechip | LOC_Os05g23260.1 |
| KEGG | osa:4338334 dosa:Os05t0297900-01 |
| Entrez-Gene | 4338334 |