RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g23430.2 View Network Show in Genome Browser |
| Other Names | Os05g0299300 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 13405324-13410805 Nucleotide Length: 546 |
| Protein-coding | LOC_Os05g23430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g43900 LOC_Os01g61580 LOC_Os04g16450 LOC_Os04g48750 LOC_Os04g47240 LOC_Os02g35010 LOC_Os02g33030 LOC_Os02g41860 LOC_Os04g44060 |
| Downstream Genes | LOC_Os12g06810 LOC_Os07g31140 LOC_Os05g39110 LOC_Os11g10100 LOC_Os07g26690 LOC_Os08g32840 LOC_Os08g32750 LOC_Os08g32780 LOC_Os07g26630 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g23430.2 |
| Rice Genome Annotation | LOC_Os05g23430.2 |
| Ricechip | LOC_Os05g23430.2 |
| KEGG | osa:4338342 dosa:Os05t0299300-01 |
| Entrez-Gene | 4338342 |