RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g23610.1 View Network Show in Genome Browser |
| Other Names | Os05g0301600 |
| Description | protein phosphatase inhibitor 2 containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 13536337-13541077 Nucleotide Length: 498 |
| Protein-coding | LOC_Os05g23610 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g16110 LOC_Os02g13640 LOC_Os03g14890 LOC_Os02g57450 LOC_Os04g36890 LOC_Os05g04530 LOC_Os02g14130 LOC_Os04g46000 LOC_Os03g55620 LOC_Os03g10940 LOC_Os02g43550 More.. |
| Downstream Genes | LOC_Os06g06880 LOC_Os08g36420 LOC_Os07g02350 LOC_Os08g36900 LOC_Os05g33040 LOC_Os06g35530 LOC_Os06g37180 LOC_Os10g41430 LOC_Os05g44210 LOC_Os10g33420 LOC_Os09g12770 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g23610.1 |
| Rice Genome Annotation | LOC_Os05g23610.1 |
| Ricechip | LOC_Os05g23610.1 |
| KEGG | osa:4338349 dosa:Os05t0301600-01 |
| Entrez-Gene | 4338349 |