RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g23720.1 View Network Show in Genome Browser |
| Other Names | Os05g0302700 |
| Description | mitochondrial carrier protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 13610549-13614441 Nucleotide Length: 1143 |
| Protein-coding | LOC_Os05g23720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g32120 LOC_Os04g32660 LOC_Os04g58580 LOC_Os02g39890 LOC_Os01g58730 LOC_Os02g40830 LOC_Os01g38510 LOC_Os03g03450 LOC_Os01g23740 LOC_Os01g49190 LOC_Os03g55150 More.. |
| Downstream Genes | LOC_Os11g26850 LOC_Os05g36070 LOC_Os11g09280 LOC_Os05g26660 LOC_Os08g17680 LOC_Os09g19734 LOC_Os05g47890 LOC_Os07g40580 LOC_Os11g11390 LOC_Os12g32240 LOC_Os08g44450 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR172a osa-miR172d-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g23720.1 |
| Rice Genome Annotation | LOC_Os05g23720.1 |
| Ricechip | LOC_Os05g23720.1 |
| KEGG | osa:4338353 dosa:Os05t0302700-01 |
| Entrez-Gene | 4338353 |