RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g23800.1 View Network Show in Genome Browser |
| Other Names | Os05g0303700 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 13668409-13672099 Nucleotide Length: 765 |
| Protein-coding | LOC_Os05g23800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g68790 LOC_Os05g13650 LOC_Os03g46770 LOC_Os02g51890 LOC_Os05g13630 LOC_Os05g13620 LOC_Os01g68524 LOC_Os03g47800 |
| Downstream Genes | LOC_Os12g43600 LOC_Os07g43810 LOC_Os09g02700 LOC_Os12g31800 LOC_Os06g37000 LOC_Os10g17454 LOC_Os08g04440 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g23800.1 |
| Rice Genome Annotation | LOC_Os05g23800.1 |
| Ricechip | LOC_Os05g23800.1 |
| KEGG | dosa:Os05t0303700-00 |