RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g24160.1 View Network Show in Genome Browser |
| Other Names | Os05g0307400 |
| Description | double-stranded RNA binding motif containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 13939693-13946672 Nucleotide Length: 1314 |
| Protein-coding | LOC_Os05g24160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0040029 | regulation of gene expression, epigenetic | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g55640 LOC_Os03g02970 LOC_Os02g16709 LOC_Os02g42600 LOC_Os01g63820 LOC_Os05g18850 LOC_Os03g53760 LOC_Os03g38740 LOC_Os02g04050 LOC_Os01g67740 LOC_Os02g04040 More.. |
| Downstream Genes | LOC_Os08g10649 LOC_Os05g49220 LOC_Os09g28000 LOC_Os09g24954 LOC_Os06g48530 LOC_Os11g40500 LOC_Os12g44390 LOC_Os05g31290 LOC_Os07g12150 LOC_Os05g41750 LOC_Os11g05556 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g24160.1 |
| Rice Genome Annotation | LOC_Os05g24160.1 |
| Ricechip | LOC_Os05g24160.1 |
| KEGG | osa:4338371 dosa:Os05t0307400-01 |
| Entrez-Gene | 4338371 |