RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g24550.3 View Network Show in Genome Browser |
| Other Names | Os05g0310500 |
| Description | Papain family cysteine protease domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 14161390-14165587 Nucleotide Length: 1170 |
| Protein-coding | LOC_Os05g24550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g57490 LOC_Os01g73980 LOC_Os04g57440 LOC_Os02g41670 LOC_Os02g41680 LOC_Os02g56000 LOC_Os05g01810 LOC_Os04g43800 LOC_Os02g41650 LOC_Os03g16920 LOC_Os03g13970 More.. |
| Downstream Genes | LOC_Os11g32240 LOC_Os06g07630 LOC_Os05g35290 LOC_Os06g02144 LOC_Os07g09060 LOC_Os12g33610 LOC_Os11g48110 LOC_Os11g09280 LOC_Os06g08770 LOC_Os09g26880 LOC_Os10g36760 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g24550.3 |
| Rice Genome Annotation | LOC_Os05g24550.3 |
| Ricechip | LOC_Os05g24550.3 |
| KEGG | osa:9267789 dosa:Os05t0310500-02 |
| Entrez-Gene | 9267789 |