RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g24770.1 View Network Show in Genome Browser |
| Other Names | Os05g0312500 |
| Description | reticulon domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 14356080-14359461 Nucleotide Length: 756 |
| Protein-coding | LOC_Os05g24770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g49420 LOC_Os03g02780 LOC_Os02g45940 LOC_Os01g61920 LOC_Os03g01870 LOC_Os02g16620 LOC_Os02g06340 LOC_Os01g53520 LOC_Os01g12650 LOC_Os04g57350 LOC_Os03g56900 More.. |
| Downstream Genes | LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os07g36500 LOC_Os05g39050 LOC_Os05g38740 LOC_Os08g18110 LOC_Os06g30750 LOC_Os08g13030 LOC_Os10g35180 LOC_Os08g12960 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g24770.1 |
| Rice Genome Annotation | LOC_Os05g24770.1 |
| Ricechip | LOC_Os05g24770.1 |
| KEGG | osa:4338381 dosa:Os05t0312500-01 |
| Entrez-Gene | 4338381 |