RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g24880.1 View Network Show in Genome Browser |
| Other Names | Os05g0313500 |
| Description | dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 14407907-14414000 Nucleotide Length: 1041 |
| Protein-coding | LOC_Os05g24880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g09490 |
| Downstream Genes | LOC_Os10g29470 LOC_Os10g07229 LOC_Os09g23540 LOC_Os11g10480 |
| Pathways | |
|---|---|
| Metacyc Pathways | THREONINE-DEG2-PWY THRDLCTCAT-PWY PWY-5448 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g24880.1 |
| Rice Genome Annotation | LOC_Os05g24880.1 |
| Ricechip | LOC_Os05g24880.1 |
| KEGG | osa:4338383 dosa:Os05t0313500-01 |
| Entrez-Gene | 4338383 |