RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g24970.1 View Network Show in Genome Browser |
| Other Names | Os05g0314100 |
| Description | LSM domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 14449503-14452183 Nucleotide Length: 321 |
| Protein-coding | LOC_Os05g24970 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g01250 LOC_Os03g13760 LOC_Os02g37430 LOC_Os04g39444 LOC_Os02g01740 LOC_Os02g03440 LOC_Os03g53220 LOC_Os02g30624 LOC_Os01g15310 LOC_Os05g07050 LOC_Os04g31950 More.. |
| Downstream Genes | LOC_Os11g43620 LOC_Os08g05530 LOC_Os10g02630 LOC_Os07g33330 LOC_Os10g34380 LOC_Os10g35550 LOC_Os08g08040 LOC_Os09g07500 LOC_Os07g41790 LOC_Os05g32310 LOC_Os07g04850 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g24970.1 |
| Rice Genome Annotation | LOC_Os05g24970.1 |
| Ricechip | LOC_Os05g24970.1 |
| KEGG | osa:4338385 dosa:Os05t0314100-02 |
| Entrez-Gene | 4338385 |